Computational Methods in Synthetic Biology

This second edition book provides complete coverage of the computational approaches currently used in Synthetic Biology. New chapters detail computational methods and algorithms for the design of bio-components, insight on CAD programs, analysis techniques, and distributed systems. Written in the hi...

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Bibliographic Details
Other Authors: Marchisio, Mario Andrea (Editor)
Format: eBook
Language:English
Published: New York, NY Humana 2021, 2021
Edition:2nd ed. 2021
Series:Methods in Molecular Biology
Subjects:
Online Access:
Collection: Springer eBooks 2005- - Collection details see MPG.ReNa
Table of Contents:
  • 1. Using a Design of Experiments Approach to Inform the Design of Hybrid Synthetic Yeast Promoters
  • Computational Design of Multiplex Oligonucleotide-Based Assays
  • Computational Methods For The Design Of Recombinase Logic Circuits
  • Modular Modeling Of Genetic Circuits in SBML Level 3.
  • CRISPR-ERA: A Webserver for Guide RNA Design of Gene Editing and Regulation
  • iGUIDE Method for CRISPR Off-target Detection
  • Web-based Base Editing Toolkits: BE-Designer and BE-Analyzer
  • Synthetic Gene Circuit Analysis and Optimization
  • Monitoring Single S. cerevisiae Cells with Multi-Frequency Electrical Impedance Spectroscopy in an Electrode-integrated Microfluidic Device
  • Construction of Protein Expression Network
  • Systems-theoretic Approaches to Design Biological Networks with Desired Functionalities
  • A Deterministic Compartmental Modeling Framework for Disease Transmission
  • Computer Aided Assembly and Verificationof Synthetic Chromosomes
  • Minimal Genome Design Algorithms using Whole-Cell Models
  • Tn-Core: Functionally Interpreting Transposon-Sequencing Data with Metabolic Network Analysis
  • Genome-scale Metabolic Modeling of Escherichia coli and its Chassis Design for Synthetic Biology Applications
  • A Systems Bioinformatics Approach to Interconnect Biological Pathways.