Genotyping Methods and Protocols

This volume explores a broad range of different genotyping techniques. Genotyping: Methods and Protocols consists of chapters that cover numerous topics such as: an overview of multiplexed microsatellite analysis; High Resolution Melt analysis and TaqMan-based assays; in situ analysis of variants in...

Full description

Bibliographic Details
Other Authors: White, Stefan J. (Editor), Cantsilieris, Stuart (Editor)
Format: eBook
Language:English
Published: New York, NY Springer New York 2017, 2017
Edition:1st ed. 2017
Series:Methods in Molecular Biology
Subjects:
Online Access:
Collection: Springer eBooks 2005- - Collection details see MPG.ReNa
LEADER 03639nmm a2200289 u 4500
001 EB001272614
003 EBX01000000000000000887256
005 00000000000000.0
007 cr|||||||||||||||||||||
008 161202 ||| eng
020 |a 9781493964420 
100 1 |a White, Stefan J.  |e [editor] 
245 0 0 |a Genotyping  |h Elektronische Ressource  |b Methods and Protocols  |c edited by Stefan J. White, Stuart Cantsilieris 
250 |a 1st ed. 2017 
260 |a New York, NY  |b Springer New York  |c 2017, 2017 
300 |a X, 254 p. 65 illus., 55 illus. in color  |b online resource 
505 0 |a Genetic Fingerprinting Using Microsatellite Markers in a Multiplex PCR Reaction: A Compilation of Methodological Approaches from Primer Design to Detection Systems -- Genotyping DNA Variants with High Resolution Melting Analysis -- High-Throughput Genotyping with TaqMan Allelic Discrimination and Allele-Specific Genotyping Assays -- In Situ Single Molecule RNA Genotyping Using Padlock Probes and Rolling Circle Amplification -- The MassARRAY® System for Targeted SNP Genotyping -- Targeted Capture and High-Throughput Sequencing Using Molecular Inversion Probes (MIPs) -- Analyzing Copy Number Variation Using Pulsed-Field Gel Electrophoresis: Providing a Genetic Diagnosis for FSHD -- Analysis of Copy Number Variation Using the Paralogue Ratio Test (PRT) -- Genotyping Complex Copy Number Variation with Multiplex Ligation-Dependent Probe Amplification (MLPA) -- Analysis of Multiallelic CNVs by Emulsion Haplotype Fusion PCR -- Analysis Using Droplet Digital PCR -- Full-Length Mitochondrial-DNA Sequencing on the PacBio RSII and Full-Length MT-DNA RSII -- Targeted Locus Amplification and Next Generation Sequencing -- Efficient, Cost-Effective, High-Throughput, Multilocus Sequencing Typing (MLST) Method, NGMLST, and the Analytical Software Program MLSTEZ -- Rapid SNP Detection and Genotyping of Bacterial Pathogens by Pyrosequencing -- Methods for Genotyping-by-Sequencing.-Describing Sequence Variants Using HGVS Nomenclature 
653 |a Human Genetics 
653 |a Human genetics 
700 1 |a Cantsilieris, Stuart  |e [editor] 
041 0 7 |a eng  |2 ISO 639-2 
989 |b Springer  |a Springer eBooks 2005- 
490 0 |a Methods in Molecular Biology 
856 4 0 |u https://doi.org/10.1007/978-1-4939-6442-0?nosfx=y  |x Verlag  |3 Volltext 
082 0 |a 599.935 
082 0 |a 611.01816 
520 |a This volume explores a broad range of different genotyping techniques. Genotyping: Methods and Protocols consists of chapters that cover numerous topics such as: an overview of multiplexed microsatellite analysis; High Resolution Melt analysis and TaqMan-based assays; in situ analysis of variants in single RNA molecules; the MassARRAY system and Molecular Inversion Probes; Pulsed Field Gel Electrophoresis, Paralogue Ratio Test, and Multiplex Ligation-Dependent Probe Amplification; long-range PCR combined with PacBio sequencing; Targeted Locus Amplification; Multilocus Sequence Typing and rapid SNP detection with pyrosequencing; and genotyping-by-sequencing for plant analysis. Finally, the volume concludes with a summary of pertinent points to describe genetic variation. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Thorough and practical, Genotyping: Methods and Protocols is a valuable resource for anyone interested in learning more about the diverse field of genotyping