Mapping protein/DNA interactions by cross-linking

Presents the process of mapping the genetic interactions of protein and DNA via cross-linking

Bibliographic Details
Corporate Authors: Institut national de la santé et de la recherche médicale (France), National Center for Biotechnology Information (U.S.)
Format: eBook
Language:English
Published: [Bethesda, MD NCBI] 2001, c2001
Subjects:
Online Access:
Collection: National Center for Biotechnology Information - Collection details see MPG.ReNa
Table of Contents:
  • Dissecting fission yeast centromeres via silencing / Robin Allshire
  • Localizing replication sties and nuclear proteins / Angela Taddei...[et al.]
  • Finding downstream target DNAs for chromatin proteins by X-CHIP in drosophila / Nicolas Nègre and Giacomo Cavalli
  • Emerging techniques : UV laser footprinting and protein-DNA crosslinking / Stefan Dimitrov
  • Nuclear organization and gene expression : visualization of transcription and higher order chromatin structure / Roel van Driel and Pernette J. Verschure
  • Examining the distribution of telomeric and DNA repair proteins by ChrIP and real-time PCR / Karine Dubrana
  • Nuclear organisation and gene silencing in lymphoctyes / Amanda Fisher and Matthias Merkenschlager
  • Direct visualization of transcription factor binding to regulatory elements in living cells / Gordon L. Hager
  • Part I. Chromatin protein complexes : dynamic assemblies in the nucleus / Donna Jovin
  • Isolation of homeodomain engrailed target genes by UV cross-linking and chromatin IP / Florence Maschat
  • Analysis of chromatin assembly, chromatin domains, and DNA replication using xenopus systems / Jean-Marc Lemaitre, Yegor Vassetzky, and Marcel Méchali
  • Binding sights in chromatin by X-ChIP / Achim Breiling and Valerio Orlando
  • Chromatin immunoprecipitation in budding yeast / Tomoyuki Tanaka
  • ChIP with native chromatin : advantages and problems relative to methods using cross-linked material / Bryan Turner
  • Highly sensitive FISH in combination with the visualization of the mammalian genome: architecture / Daniele Zink
  • Part II. Fly-FISHing: a protocol to localize single copy genes inside the nucleus in whole mount embryos / Mark J. Gemkow
  • Part 2. Detailed method for immunoprecipitation of unfixed chromatin from mammalian cells / Laura O'Neill and Bryan Turner
  • Includes bibliographical references