DNA Microarrays: Gene Expression Applications

This complete and practical manual on expression measurement using DNA arrays covers the existing methods (from nylon macroarrays to oligonucleotide chips) and includes detailed protocols. It has been written by practising scientists who have experienced the difficulties involved in actually using m...

Full description

Bibliographic Details
Other Authors: Jordan, B.R. (Editor)
Format: eBook
Language:English
Published: Berlin, Heidelberg Springer Berlin Heidelberg 2001, 2001
Edition:1st ed. 2001
Series:Principles and Practice
Subjects:
Online Access:
Collection: Springer Book Archives -2004 - Collection details see MPG.ReNa
LEADER 04446nmm a2200361 u 4500
001 EB000665003
003 EBX01000000000000001349824
005 00000000000000.0
007 cr|||||||||||||||||||||
008 140122 ||| eng
020 |a 9783642565175 
100 1 |a Jordan, B.R.  |e [editor] 
245 0 0 |a DNA Microarrays: Gene Expression Applications  |h Elektronische Ressource  |c edited by B.R. Jordan 
250 |a 1st ed. 2001 
260 |a Berlin, Heidelberg  |b Springer Berlin Heidelberg  |c 2001, 2001 
300 |a IX, 140 p. 18 illus., 1 illus. in color  |b online resource 
505 0 |a 5 Applications -- 6 From Gene Expression Data to Gene Regulatory Networks -- 7 Conclusions -- References -- 7 Future Trends in the Use of DNA Arrays for Expression Measurement -- 1 Introduction -- 2 Future Chips: How Complex? -- 3 From “Clone-Based” to “Sequence-Based Arrays” -- 4 From “Home-Made” Microarrays to Ready-Made Chips -- 5 From “Stand Alone” Array to Integrated “Lab-on-a-Chip” -- 6 From Fluorescent Labelling to Electrical Detection -- 7 Progress Towards More Sophisticated Data Interpretation and (Maybe) a Unified Expression Repository -- 8 Expression Measurement Is Here to Stay -- References 
505 0 |a 6 Protocol 1: Preparation of cDNA Targets for Microarray Fabrication -- 7 Protocol 2: cDNA Complex Probe Labeling -- 8 Protocol 3: Array Hybridization and Color Development -- 9 Protocol 4: Modified Catalyzed Reporter Deposition (CARD) Method -- References -- 4 cDNA Macroarrays and Microarrays on Nylon Membranes with Radioactive Detection -- 1 Introduction -- 2 Manufacture of Nylon Arrays -- 3 Labelling and Hybridisation with Complex Probes from Total RNA -- 4 Signal Analysis -- 5 Protocol 1: Array Preparation -- 6 Protocol 2: RNA Preparation -- 7 Protocol 3: Labelling -- 8 Protocol 4: Hybridisation -- 9 Protocol 5: Data Processing -- References -- 5 Oligonucleotide Chips for Expression Analysis: Principles and Practical Procedures -- 1 Introduction -- 2 Principles -- 3 Bioinformatics -- 4 Conclusion -- References -- 6 Gene Expression Data Mining andAnalysis -- 1 Introduction -- 2 From Raw Data to Gene Expression Matrix -- 3 Gene Expression Matrix Analysis -- 4 Expression Profiler --  
505 0 |a 1 DNA Arrays for Expression Measurement: An Historical Perspective -- 1 Introduction -- 2 The Forerunners: Colony Filters and Dot Blots -- 3 “High-Density” Filters -- 4 Colony Filters and Expression Analysis (Qualitative) -- 5 Quantifying Expression with High-Density Filters -- 6 Miniaturisation: cDNA Microarrays -- 7 Miniaturisation: Oligonucleotide Chips -- 8 Data Acquisition, Storage and Mining -- 9 A (Provisional) Conclusion -- References -- 2 Expression Profiling with cDNA Microarrays: A User’s Perspective and Guide -- 1 Introduction -- 2 Expression Profiling with cDNA Microarrays: The Basics -- 3 Production of cDNA Microarrays -- 4 Conclusions -- 5 Protocols -- References -- 3 cDNA Microarrays on Nylon Membranes with Enzyme Colorimetrie Detection -- 1 Introduction -- 2 Fabrication of Microarrays on Nylon Membranes -- 3 Enzyme Colorimetrie Detection -- 4 Characteristics of the Microarray/CD System -- 5 Data Processing in the Microarray/CD System --  
653 |a Cell Biology 
653 |a Medical Genetics 
653 |a Medicine / Research 
653 |a Cytology 
653 |a Biology / Research 
653 |a Medical genetics 
653 |a Biomedical Research 
041 0 7 |a eng  |2 ISO 639-2 
989 |b SBA  |a Springer Book Archives -2004 
490 0 |a Principles and Practice 
028 5 0 |a 10.1007/978-3-642-56517-5 
856 4 0 |u https://doi.org/10.1007/978-3-642-56517-5?nosfx=y  |x Verlag  |3 Volltext 
082 0 |a 616.042 
520 |a This complete and practical manual on expression measurement using DNA arrays covers the existing methods (from nylon macroarrays to oligonucleotide chips) and includes detailed protocols. It has been written by practising scientists who have experienced the difficulties involved in actually using microarrays, and provides helpful advice and hints on setting up these powerful but sometimes tricky methods. Software, data mining procedures and probable future developments, which should be useful to any practising scientist interested in expression measurement, are also covered in this book. It also provides detailed protocols as well as many helpful hints to achieve experimental success and to avoid pitfalls