Chemogenomics and Chemical Genetics A User's Introduction for Biologists, Chemists and Informaticians

Biological and chemical sciences have undergone an unprecedented transformation, reflected by the huge use of parallel and automated technologies in key fields such as genome sequencing, DNA chips, nanoscale functional biology or combinatorial chemistry. It is now possible to generate and store from...

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Bibliographic Details
Other Authors: MARECHAL, ERIC. (Editor), Roy, Sylvaine (Editor), Lafanechère, Laurence (Editor)
Format: eBook
Language:English
Published: Berlin, Heidelberg Springer Berlin Heidelberg 2011, 2011
Edition:1st ed. 2011
Subjects:
Online Access:
Collection: Springer eBooks 2005- - Collection details see MPG.ReNa
Table of Contents:
  • The pharmacological screening process:the small molecule, the biological target, the robot, the signal and the information
  • Collections of molecules for screening: example of the French National Chemical Library
  • The miniaturised biological assay: constraints and limitations
  • The signal: statistical aspects, standardisation, elementary analysis
  • Measuring bioactivity: Ki, IC50 and EC50
  • Modelling the pharmacological screening:controlling the processes and the chemical, biological and experimental information
  • Quality procedures in automated screening
  • Phenotypic screening of cells and the strategies for direct chemical genetics
  • High information content screens for forward (phenotypic screening of organisms) and reverse (structural screening by NMR) chemical genetics
  • Some principles of Diversity-Oriented Synthesis
  • Molecular descriptors and similarity indices
  • Lipophilicity of molecules: a predominant descriptor for QSAR
  • The annotation and classification of chemical space in chemogenomics
  • The annotation and classification of biological space in chemogenomics
  • Machine learning and screening data
  • Virtual screening by molecular docking
  • Biodiversity as a source of small molecules for pharmacological screening: libraries of plant extracts