Computational Methods in Systems Biology International Conference CMSB 2004, Paris, France, May 26-28, 2004, Revised Selected Papers

The Computational Methods in Systems Biology (CMSB) workshop series was established in 2003 by Corrado Priami. The purpose of the workshop series is to help catalyze the convergence between computer scientists interested in language design, concurrency theory, software engineering or program verific...

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Bibliographic Details
Other Authors: Danos, Vincent (Editor), Schachter, Vincent (Editor)
Format: eBook
Language:English
Published: Berlin, Heidelberg Springer Berlin Heidelberg 2005, 2005
Edition:1st ed. 2005
Series:Lecture Notes in Bioinformatics
Subjects:
Online Access:
Collection: Springer eBooks 2005- - Collection details see MPG.ReNa
Table of Contents:
  • Long Papers
  • An Explicit Upper Bound for the Approximation Ratio of the Maximum Gene Regulatory Network Problem
  • Autonomous Mobile Robot Control Based on White Blood Cell Chemotaxis
  • Beta Binders for Biological Interactions
  • Biomimetic in Silico Devices
  • Building and Analysing an Integrative Model of HIV-1 RNA Alternative Splicing
  • Graph-Based Modeling of Biological Regulatory Networks: Introduction of Singular States
  • IMGT-Choreography: Processing of Complex Immunogenetics Knowledge
  • Model Checking Biological Systems Described Using Ambient Calculus
  • Modeling the Molecular Network Controlling Adhesion Between Human Endothelial Cells: Inference and Simulation Using Constraint Logic Programming
  • Modelling Metabolic Pathways Using Stochastic Logic Programs-Based Ensemble Methods
  • Projective Brane Calculus
  • Residual Bootstrapping and Median Filtering for Robust Estimation of Gene Networks from Microarray Data
  • Spatial Modeling and Simulation of Diffusion in Nuclei of Living Cells
  • The Biochemical Abstract Machine BIOCHAM
  • Towards Reusing Model Components in Systems Biology
  • VICE: A VIrtual CEll
  • Short Papers
  • Biological Domain Identification Based in Codon Usage by Means of Rule and Tree Induction
  • Black Box Checking for Biochemical Networks
  • CMBSlib: A Library for Comparing Formalisms and Models of Biological Systems
  • Combining State-Based and Scenario-Based Approaches in Modeling Biological Systems
  • Developing SBML Beyond Level 2: Proposals for Development
  • General Stochastic Hybrid Method for the Simulation of Chemical Reaction Processes in Cells
  • The Biodegradation Network, a New Scenario for Computational Systems Biology Research
  • Invited Contributions
  • Brane Calculi