Protein Networks and Pathway Analysis
From the beginning of the OMICs biology era, science has been pursuing the reduction of the complex "genome-wide" assays in order to understand the essential biology that lies beneath it. In Protein Networks and Pathway Analysis, expert practitioners present a compilation of methods of fu...
| Other Authors: | , |
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| Format: | eBook |
| Language: | English |
| Published: |
Totowa, NJ
Humana
2009, 2009
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| Edition: | 1st ed. 2009 |
| Series: | Methods in Molecular Biology
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| Subjects: | |
| Online Access: | |
| Collection: | Springer eBooks 2005- - Collection details see MPG.ReNa |
Table of Contents:
- I: Interactions
- Mining Protein–Protein Interactions from Published Literature Using Linguamatics I2E
- Relative Avidity, Specificity, and Sensitivity of Transcription Factor–DNA Binding in Genome-Scale Experiments
- Curation of Inhibitor-Target Data: Process and Impact on Pathway Analysis
- Profiling Protein Interaction Networks with Functional Protein Microarrays
- Manual Annotation of Protein Interactions
- II: Analysis
- Gene Set Enrichment Analysis
- PANTHER Pathway: An Ontology-Based Pathway Database Coupled with Data Analysis Tools
- Prioritizing Genes for Pathway Impact Using Network Analysis
- Discovering Biological Networks from Diverse Functional Genomic Data
- Functional Analysis of OMICs Data and Small Molecule Compounds in an Integrated “Knowledge-Based” Platform
- Kinetic Modeling as a Tool to Integrate Multilevel Dynamic Experimental Data
- Cytoscape: A Community-Based Framework for Network Modeling
- Semantic Data Integration and Knowledge Management to Represent Biological Network Associations
- Solutions for Complex, Multi Data Type and Multi Tool Analysis: Principles and Applications of Using Workflow and Pipelining Methods
- III: Applications
- High-Throughput siRNA Screening as a Method of Perturbation of Biological Systems and Identification of Targeted Pathways Coupled with Compound Screening
- Pathway and Network Analysis with High-Density Allelic Association Data
- miRNAs: From Biogenesis to Networks
- MetaMiner (CF): A Disease-Oriented Bioinformatics Analysis Environment
- Translational Research and Biomedical Informatics
- ArrayTrack: An FDA and Public Genomic Tool