Multiscale Approaches to Protein Modeling

Multiscale Approaches to Protein Modeling is a comprehensive review of the most advanced multiscale methods for protein structure prediction, computational studies of protein dynamics, folding mechanisms and macromolecular interactions. The approaches span a wide range of the levels of coarse-graine...

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Bibliographic Details
Other Authors: Kolinski, Andrzej (Editor)
Format: eBook
Language:English
Published: New York, NY Springer New York 2011, 2011
Edition:1st ed. 2011
Subjects:
Online Access:
Collection: Springer eBooks 2005- - Collection details see MPG.ReNa
Table of Contents:
  • Preface
  • Lattice polymers and protein models
  • Multiscale approach to protein and peptide docking
  • Coarse-grained models of proteins: theory and applications
  • Coarse-grained modeling of biomolecules with transferable force field
  • Effective all-atom potentials for protein studies
  • Statistical contact potentials in protein coarse-grained modeling: From pair to multi-body potentials
  • Bridging the atomic and coarse-grained descriptions of collective motions in proteins
  • Structure-based models of biomolecules: stretching of proteins, dynamics of knots, hydrodynamic effects, and indentation of virus capsids
  • Sampling protein energy landscapes –the quest for efficient algorithms
  • Protein structure prediction: from recognition of matches with known structures to recombination of fragments
  • Genome-wide protein structure prediction using template fragment reassembly
  • Multiscale approach to protein folding dynamics
  • Error estimation of template-based protein structure models
  • Evaluation of protein structure prediction methods: issues and strategies
  • Index