1 Table of Contents: “... analyses -- Inferring phase -- Problems with haplotype analyses -- Imputation -- Genetic association...”

2 Table of Contents: “...Effect of population structure in generating spurious associations -- Cause of problem...”

3 Table of Contents: “...) -- Measures of LD -- Disease-marker association -- LD due to linkage -- LD due to admixture -- Haplotype...”

4 Table of Contents: “...Linkage vs. association -- The need for fine mapping -- The genealogy underlying a sample of case...”