In June 2015 Roy was removed from his post of director of ISI, just one month before the end of his appointment. This action was harshly criticised by the international academic community.
Currently he is working on Combinatorics, and application of Statistics in Cryptology and Design of Experiments.
In 2015, Roy was awarded Padma Shri, India's fourth highest civilian honour, recognizing his accomplishments and contribution to education. In 2019, Roy was appointed as the chairperson of the National Statistical Commission, Ministry of Statistics and Programme Implementation, Government of India.
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