Fungal Genomics Methods and Protocols

Having experienced unprecedented growth since the turn of the millennium, the dramatic expansion of resources and techniques in fungal genomics is poised to fundamentally redefine the study of fungal biology.  In Fungal Genomics: Methods and Protocols, expert researchers explore the three most likel...

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Bibliographic Details
Other Authors: Xu, Jin-Rong (Editor), Bluhm, Burton H. (Editor)
Format: eBook
Published: Totowa, NJ Humana Press 2011, 2011
Edition:1st ed. 2011
Series:Methods in Molecular Biology
Online Access:
Collection: Springer eBooks 2005- - Collection details see MPG.ReNa
Table of Contents:
  • Genome Sequencing and Assembly
  • Targeted Cloning of Fungal Telomeres
  • Identification and Annotation of Repetitive Sequences in Fungal Genomes
  • Next-Generation Sequencing and Potential Applications in Fungal Genomics
  • Getting the Most Out of Your Fungal Microarray Data: Two Cost and Time-Effective Methods
  • Fusarium graminearum from Expression Analysis to Functional Assays
  • EST Analysis Pipeline: Use of Distributed Computing Resources
  • The Application of ChIP-chip Analysis in the Rice Blast Pathogen
  • Proteome Studies of Filamentous Fungi
  • A Bioinformatics Pipeline for Sequence-Based Analyses of Fungal Biodiversity
  • Identifying Protein Complexes by Affinity Purification and Mass Spectrometry Analysis in the Rice Blast Fungus
  • Large Scale Identification of Genes Involved in Plant-Fungal Interactions Using Illumina’s Sequencing-By-Synthesis Technology
  • High-Throughput Production of Gene Replacement Mutants in Neurospora crassa
  • Phenotypic Analysis of Neurospora crassa Gene Deletion Strains
  • Efficient Approaches for Generating GFP Fusion and Epitope-Tagging Constructs in Filamentous Fungi
  • Large Scale Insertional Mutagenesis in Magnaporthe oryzae by Agrobacterium tumefaciens-Mediated Transformation
  • Molecular Methods for Studying the Cryphonectria parasitica – Hypovirus Experimental System
  • Metabolic Fingerprinting in Fusarium verticillioides to Determine Gene Function
  • Tapping Genomics to Unravel Ectomycorrhizal Symbiosis